hu.MAP 2.0: Complex View
Human Protein Complex Map
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Complex: HuMAP2_01570
Confidence: Medium
ProteinsGenename | Protein Name | Links |
---|---|---|
RRN3 | RNA polymerase I-specific transcription initiation factor RRN3 (Transcription initiation factor IA) (TIF-IA) | UniProt NCBI |
ZNRD1 | DNA-directed RNA polymerase I subunit RPA12 (Zinc ribbon domain-containing protein 1) | UniProt NCBI |
TWISTNB | DNA-directed RNA polymerase I subunit RPA43 (Twist neighbor protein) | UniProt NCBI |
POLR1A | DNA-directed RNA polymerase I subunit RPA1 (RNA polymerase I subunit A1) (EC 2.7.7.6) (A190) (DNA-directed RNA polymerase I largest subunit) (DNA-directed RNA polymerase I subunit A) (RNA polymerase I 194 kDa subunit) (RPA194) | UniProt NCBI |
POLR1D | Protein POLR1D, isoform 2 | UniProt NCBI |
POLR1B | DNA-directed RNA polymerase I subunit RPA2 (RNA polymerase I subunit 2) (EC 2.7.7.6) (DNA-directed RNA polymerase I 135 kDa polypeptide) (RPA135) | UniProt NCBI |
Enrichments
Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
---|---|---|---|---|
REAC:R-HSA-73762 | 1.16219267265e-13 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | RNA Polymerase I Transcription Initiation |
GO:0006361 | 2.99152107499e-12 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | transcription initiation from RNA polymerase I promoter |
KEGG:03020 | 6.47647447453e-12 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | RNA polymerase |
REAC:R-HSA-73772 | 6.73893589242e-12 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | RNA Polymerase I Promoter Escape |
REAC:R-HSA-73854 | 2.19180564881e-11 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | RNA Polymerase I Promoter Clearance |
REAC:R-HSA-73864 | 2.3182559747e-11 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | RNA Polymerase I Transcription |
REAC:R-HSA-73863 | 2.73417670054e-11 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | RNA Polymerase I Transcription Termination |
GO:0001054 | 6.3229743118e-11 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | RNA polymerase I activity |
GO:0005736 | 6.3229743118e-11 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | RNA polymerase I complex |
GO:0006360 | 1.48743735386e-10 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | transcription by RNA polymerase I |
WP:WP4022 | 9.1170755239e-10 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | Pyrimidine metabolism |
GO:0006362 | 5.82915372209e-09 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | transcription elongation from RNA polymerase I promoter |
REAC:R-HSA-5250924 | 6.65761939932e-09 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | B-WICH complex positively regulates rRNA expression |
GO:0006363 | 8.33923893666e-09 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | termination of RNA polymerase I transcription |
REAC:R-HSA-5250913 | 1.47378888902e-08 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | Positive epigenetic regulation of rRNA expression |
REAC:R-HSA-427413 | 1.54739123893e-08 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | NoRC negatively regulates rRNA expression |
REAC:R-HSA-5250941 | 1.78599987084e-08 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | Negative epigenetic regulation of rRNA expression |
GO:0003899 | 2.13866479475e-08 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | DNA-directed 5'-3' RNA polymerase activity |
GO:0034062 | 3.22787683477e-08 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | 5'-3' RNA polymerase activity |
GO:0097747 | 3.22787683477e-08 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | RNA polymerase activity |
REAC:R-HSA-212165 | 8.24751451013e-08 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | Epigenetic regulation of gene expression |
GO:0045815 | 2.45328000896e-07 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | positive regulation of gene expression, epigenetic |
GO:0006352 | 3.55443487864e-07 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | DNA-templated transcription, initiation |
GO:0006353 | 7.3546313708e-07 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | DNA-templated transcription, termination |
GO:0055029 | 2.98904170003e-06 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | nuclear DNA-directed RNA polymerase complex |
GO:0000428 | 3.15131232749e-06 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | DNA-directed RNA polymerase complex |
GO:0030880 | 3.68082360643e-06 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | RNA polymerase complex |
GO:0006354 | 4.71954327875e-06 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | DNA-templated transcription, elongation |
GO:0016779 | 6.26212265329e-06 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | nucleotidyltransferase activity |
CORUM:1558 | 8.39001385941e-06 | 0.333333333333 | POLR1B RRN3 | POLR1B-RRN3 complex |
WP:WP405 | 1.59103859767e-05 | 0.5 | POLR1B POLR1A POLR1D | Eukaryotic Transcription Initiation |
CORUM:1557 | 2.51655344529e-05 | 0.333333333333 | POLR1B RRN3 | NMI-POLR1B-RRN3 complex |
GO:0044452 | 4.81463539559e-05 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | nucleolar part |
REAC:R-HSA-74160 | 6.720667947e-05 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | Gene expression (Transcription) |
GO:0061695 | 0.000213275731053 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | transferase complex, transferring phosphorus-containing groups |
GO:0005730 | 0.000793435083069 | 1.0 | POLR1B POLR1A TWISTNB ZNRD1 POLR1D RRN3 | nucleolus |
GO:0040029 | 0.000840887462586 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | regulation of gene expression, epigenetic |
GO:0140098 | 0.00108021890927 | 0.833333333333 | ZNRD1 TWISTNB POLR1A POLR1B POLR1D | catalytic activity, acting on RNA |
CORUM:5233 | 0.00230653586609 | 0.333333333333 | POLR1B POLR1A | TNF-alpha/NF-kappa B signaling complex 5 |
CORUM:1559 | 0.0499726005494 | 0.166666666667 | RRN3 | NMI-RRN3 complex |
Edges
Protein 1 | Protein 2 | Score | Precision | Evidence |
---|---|---|---|---|
POLR1A | POLR1B | 1.0 | 0.949 | hein_WMM bioplex_WMM hein (POLR1A) Malo fraction treiber_WMM |
POLR1A | POLR1D | 1.0 | 0.949 | hein_WMM bioplex_WMM hein (POLR1A) Malo fraction |
POLR1D | POLR1B | 1.0 | 0.949 | hein_WMM bioplex_WMM Malo fraction |
TWISTNB | POLR1A | 0.999 | 0.949 | hein_WMM bioplex (TWISTNB) bioplex_WMM hein (POLR1A) Malo fraction |
TWISTNB | POLR1B | 0.937 | 0.85 | hein_WMM bioplex (TWISTNB) bioplex_WMM Malo fraction |
TWISTNB | POLR1D | 0.935 | 0.85 | hein_WMM bioplex (TWISTNB) bioplex_WMM Malo fraction |
RRN3 | TWISTNB | 0.315 | 0.51 | hein_WMM bioplex (TWISTNB) bioplex_WMM |
POLR1A | ZNRD1 | 0.201 | 0.451 | hein_WMM hein (POLR1A) |
RRN3 | POLR1A | 0.152 | 0.41 | hein_WMM bioplex_WMM hein (POLR1A) |
RRN3 | POLR1D | 0.009 | 0.109 | hein_WMM bioplex_WMM WMM_only |
POLR1D | ZNRD1 | 0.009 | 0.101 | hein_WMM WMM_only |
RRN3 | POLR1B | 0.009 | 0.089 | hein_WMM bioplex_WMM WMM_only |
POLR1B | ZNRD1 | 0.008 | 0.088 | hein_WMM WMM_only |
RRN3 | ZNRD1 | 0.008 | 0.034 | hein_WMM WMM_only |
TWISTNB | ZNRD1 | 0.007 | 0.008 | hein_WMM WMM_only |
Images
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Complex HuMAP2_01570 has an average edge precision of 0.486 which is ranked 2580 out of all 6965 complexes.
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