hu.MAP 2.0: Complex View
Human Protein Complex Map
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Complex: HuMAP2_02036
Confidence: Medium
Proteins| Genename | Protein Name | Links |
|---|---|---|
| SNRNP40 | U5 small nuclear ribonucleoprotein 40 kDa protein (U5 snRNP 40 kDa protein) (U5-40K) (38 kDa-splicing factor) (Prp8-binding protein) (hPRP8BP) (U5 snRNP-specific 40 kDa protein) (WD repeat-containing protein 57) | UniProt NCBI |
| PAXBP1 | PAX3- and PAX7-binding protein 1 (GC-rich sequence DNA-binding factor 1) | UniProt NCBI |
| RSRC1 | Serine/Arginine-related protein 53 (SRrp53) (Arginine/serine-rich coiled-coil protein 1) | UniProt NCBI |
| GGCT | Gamma-glutamylcyclotransferase (EC 4.3.2.9) (Cytochrome c-releasing factor 21) | UniProt NCBI |
| TFIP11 | Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1) | UniProt NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
| CORUM:351 | 0.000596572408668 | 0.6 | PAXBP1 SNRNP40 TFIP11 | Spliceosome |
| CORUM:1181 | 0.0199413185249 | 0.4 | SNRNP40 TFIP11 | C complex spliceosome |
Edges
| Protein 1 | Protein 2 | Score | Precision | Evidence |
|---|---|---|---|---|
| TFIP11 | PAXBP1 | 1.0 | 0.949 | bioplex_WMM Guru youn_WMM Malo gupta_WMM fraction treiber_WMM |
| RSRC1 | PAXBP1 | 0.998 | 0.941 | bioplex (RSRC1) bioplex_WMM youn_WMM |
| RSRC1 | TFIP11 | 0.995 | 0.924 | hein_WMM bioplex (RSRC1) bioplex_WMM youn_WMM |
| SNRNP40 | PAXBP1 | 0.327 | 0.516 | bioplex (SNRNP40) bioplex_WMM youn_WMM gupta_WMM |
| SNRNP40 | TFIP11 | 0.217 | 0.465 | bioplex (SNRNP40) bioplex_WMM youn_WMM gupta_WMM |
| SNRNP40 | RSRC1 | 0.111 | 0.379 | bioplex (RSRC1,SNRNP40) bioplex_WMM youn_WMM fraction |
| GGCT | SNRNP40 | 0.041 | 0.269 | bioplex_WMM youn_WMM fraction |
| GGCT | TFIP11 | 0.007 | 0.002 | youn_WMM WMM_only |
Images
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Complex HuMAP2_02036 has an average edge precision of 0.556 which is ranked 2163 out of all 6965 complexes.
Related Complexes
| Genename | Complexes |
|---|---|
| SNRNP40 | HuMAP2_00104 HuMAP2_02036 HuMAP2_02954 HuMAP2_04421 HuMAP2_05096 HuMAP2_05156 HuMAP2_06826 |
| PAXBP1 | HuMAP2_02036 HuMAP2_03816 HuMAP2_05156 |
| RSRC1 | HuMAP2_02036 HuMAP2_03816 HuMAP2_05156 |
| GGCT | HuMAP2_00104 HuMAP2_02036 HuMAP2_04421 HuMAP2_05096 HuMAP2_05156 |
| TFIP11 | HuMAP2_02036 HuMAP2_03816 HuMAP2_05156 |