hu.MAP 2.0: Complex View
Human Protein Complex Map
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Complex: HuMAP2_03998
Confidence: Medium
Proteins| Genename | Protein Name | Links |
|---|---|---|
| RBM10 | RNA-binding protein 10 (G patch domain-containing protein 9) (RNA-binding motif protein 10) (RNA-binding protein S1-1) (S1-1) | UniProt NCBI |
| VPS36 | Vacuolar protein-sorting-associated protein 36 (ELL-associated protein of 45 kDa) (ESCRT-II complex subunit VPS36) | UniProt NCBI |
| VPS25 | Vacuolar protein-sorting-associated protein 25 (hVps25) (Dermal papilla-derived protein 9) (ELL-associated protein of 20 kDa) (ESCRT-II complex subunit VPS25) | UniProt NCBI |
| SNF8 | Vacuolar-sorting protein SNF8 (ELL-associated protein of 30 kDa) (ESCRT-II complex subunit VPS22) (hVps22) | UniProt NCBI |
| SUGP1 | SURP and G-patch domain-containing protein 1 (RNA-binding protein RBP) (Splicing factor 4) | UniProt NCBI |
| BTAF1 | TATA-binding protein-associated factor 172 (EC 3.6.4.-) (ATP-dependent helicase BTAF1) (B-TFIID transcription factor-associated 170 kDa subunit) (TAF(II)170) (TBP-associated factor 172) (TAF-172) | UniProt NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
| CORUM:1187 | 2.25356268047e-09 | 0.5 | VPS36 VPS25 SNF8 | ESCRT-II complex |
| GO:0000814 | 1.81637152046e-06 | 0.5 | VPS36 VPS25 SNF8 | ESCRT II complex |
| GO:0043328 | 7.26438828159e-06 | 0.5 | VPS36 VPS25 SNF8 | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
| GO:0032511 | 1.81582264982e-05 | 0.5 | VPS36 VPS25 SNF8 | late endosome to vacuole transport via multivesicular body sorting pathway |
| REAC:R-HSA-917729 | 2.6656058306e-05 | 0.5 | VPS36 VPS25 SNF8 | Endosomal Sorting Complex Required For Transport (ESCRT) |
| GO:0045324 | 0.000518697707158 | 0.5 | VPS36 VPS25 SNF8 | late endosome to vacuole transport |
| GO:0032509 | 0.00175581235783 | 0.5 | VPS36 VPS25 SNF8 | endosome transport via multivesicular body sorting pathway |
| GO:0043162 | 0.00206534926206 | 0.5 | VPS36 VPS25 SNF8 | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
| KEGG:04144 | 0.00329433483006 | 0.5 | VPS36 VPS25 SNF8 | Endocytosis |
| GO:0036452 | 0.00416378298645 | 0.5 | VPS36 VPS25 SNF8 | ESCRT complex |
| GO:0071985 | 0.00529364410104 | 0.5 | VPS36 VPS25 SNF8 | multivesicular body sorting pathway |
| HPA:039010_23 | 0.00725246096259 | 0.666666666667 | VPS36 SUGP1 RBM10 SNF8 | salivary gland; glandular cells[Approved,High] |
| GO:0036258 | 0.00734442516369 | 0.5 | VPS36 VPS25 SNF8 | multivesicular body assembly |
| GO:0036257 | 0.00813009778332 | 0.5 | VPS36 VPS25 SNF8 | multivesicular body organization |
| GO:0072666 | 0.0178456165824 | 0.5 | VPS36 VPS25 SNF8 | establishment of protein localization to vacuole |
| GO:0072665 | 0.0447070305646 | 0.5 | VPS36 VPS25 SNF8 | protein localization to vacuole |
| HPA:005010_23 | 0.0479998338599 | 0.666666666667 | VPS36 SUGP1 RBM10 SNF8 | bronchus; respiratory epithelial cells[Approved,High] |
Edges
| Protein 1 | Protein 2 | Score | Precision | Evidence |
|---|---|---|---|---|
| VPS36 | VPS25 | 1.0 | 0.949 | hein_WMM bioplex (VPS36) bioplex_WMM Guru hein (VPS25) fraction |
| VPS36 | SNF8 | 0.999 | 0.949 | hein_WMM bioplex (VPS36) bioplex_WMM hein (SNF8) fraction |
| VPS25 | SNF8 | 0.999 | 0.948 | hein_WMM bioplex_WMM hein (VPS25) fraction |
| SNF8 | SUGP1 | 0.087 | 0.353 | fraction |
| VPS25 | SUGP1 | 0.087 | 0.352 | gupta_WMM fraction |
| SNF8 | BTAF1 | 0.037 | 0.264 | fraction |
| RBM10 | SUGP1 | 0.023 | 0.21 | hein_WMM bioplex (SUGP1) bioplex_WMM youn_WMM gupta_WMM treiber_WMM |
| VPS36 | SUGP1 | 0.019 | 0.183 | fraction |
| SUGP1 | BTAF1 | 0.007 | 0.006 | youn_WMM WMM_only |
| RBM10 | VPS36 | 0.007 | 0.006 | bioplex_WMM WMM_only |
| RBM10 | BTAF1 | 0.007 | 0.005 | youn_WMM WMM_only |
| RBM10 | VPS25 | 0.007 | 0.003 | gupta_WMM WMM_only |
Images
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Complex HuMAP2_03998 has an average edge precision of 0.352 which is ranked 3907 out of all 6965 complexes.
Related Complexes
| Genename | Complexes |
|---|---|
| RBM10 | HuMAP2_00440 HuMAP2_00646 HuMAP2_03045 HuMAP2_03283 HuMAP2_03998 HuMAP2_05731 HuMAP2_06542 |
| VPS36 | HuMAP2_00588 HuMAP2_03699 HuMAP2_03998 HuMAP2_04660 HuMAP2_05450 HuMAP2_05663 |
| VPS25 | HuMAP2_03699 HuMAP2_03998 HuMAP2_05450 HuMAP2_05663 |
| SNF8 | HuMAP2_03699 HuMAP2_03998 HuMAP2_05450 HuMAP2_05663 |
| SUGP1 | HuMAP2_03998 HuMAP2_05450 HuMAP2_05663 |
| BTAF1 | HuMAP2_03998 HuMAP2_05663 |