hu.MAP 2.0: Complex View
Human Protein Complex Map
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Complex: HuMAP2_04023
Confidence: Medium
ProteinsGenename | Protein Name | Links |
---|---|---|
SYNM | Synemin (Desmuslin) | UniProt NCBI |
NEFM | Neurofilament medium polypeptide (NF-M) (160 kDa neurofilament protein) (Neurofilament 3) (Neurofilament triplet M protein) | UniProt NCBI |
NEFL | Neurofilament light polypeptide (NF-L) (68 kDa neurofilament protein) (Neurofilament triplet L protein) | UniProt NCBI |
NEFH | Neurofilament heavy polypeptide (NF-H) (200 kDa neurofilament protein) (Neurofilament triplet H protein) | UniProt NCBI |
INA | Alpha-internexin (Alpha-Inx) (66 kDa neurofilament protein) (NF-66) (Neurofilament-66) (Neurofilament 5) | UniProt NCBI |
NES | Nestin | UniProt NCBI |
SYNC | Syncoilin (Syncoilin intermediate filament 1) (Syncoilin-1) | UniProt NCBI |
SPATA22 | Spermatogenesis-associated protein 22 (Testis development protein NYD-SP20) | UniProt NCBI |
DES | Desmin | UniProt NCBI |
VIM | Vimentin | UniProt NCBI |
XPNPEP3 | Xaa-Pro aminopeptidase 3 (X-Pro aminopeptidase 3) (EC 3.4.11.9) (Aminopeptidase P3) (APP3) | UniProt NCBI |
Enrichments
Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
---|---|---|---|---|
GO:0005882 | 3.48862477582e-13 | 0.727272727273 | DES NEFH NES NEFM SYNM VIM NEFL INA | intermediate filament |
GO:0045111 | 1.64691968071e-11 | 0.727272727273 | DES NEFH NES NEFM SYNM VIM NEFL INA | intermediate filament cytoskeleton |
GO:0045103 | 2.4549713949e-09 | 0.545454545455 | DES NEFH NEFM SYNM NEFL NES | intermediate filament-based process |
GO:0045104 | 2.4549713949e-09 | 0.545454545455 | DES NEFH NEFM SYNM NEFL NES | intermediate filament cytoskeleton organization |
GO:0005200 | 3.75277774579e-09 | 0.636363636364 | DES NEFH NEFM SYNM VIM NEFL INA | structural constituent of cytoskeleton |
GO:0005883 | 1.20667211847e-07 | 0.363636363636 | NEFH NEFM INA NEFL | neurofilament |
GO:0099513 | 1.40079619029e-06 | 0.727272727273 | DES NEFH NES NEFM SYNM VIM NEFL INA | polymeric cytoskeletal fiber |
GO:0033693 | 1.49850650438e-05 | 0.272727272727 | NEFM NEFL NEFH | neurofilament bundle assembly |
GO:0099512 | 1.59921657141e-05 | 0.727272727273 | DES NEFH NES NEFM SYNM VIM NEFL INA | supramolecular fiber |
GO:0099081 | 1.7517714484e-05 | 0.727272727273 | DES NEFH NES NEFM SYNM VIM NEFL INA | supramolecular polymer |
GO:0099080 | 1.77839322092e-05 | 0.727272727273 | DES NEFH NES NEFM SYNM VIM NEFL INA | supramolecular complex |
GO:0045109 | 1.90667842707e-05 | 0.363636363636 | NEFM DES NEFL NEFH | intermediate filament organization |
WP:WP2447 | 0.000168663889087 | 0.272727272727 | NEFM NEFL NEFH | Amyotrophic lateral sclerosis (ALS) |
KEGG:05014 | 0.000275749154946 | 0.272727272727 | NEFM NEFL NEFH | Amyotrophic lateral sclerosis (ALS) |
GO:0005198 | 0.000510115903438 | 0.636363636364 | DES NEFH NEFM SYNM VIM NEFL INA | structural molecule activity |
GO:0045110 | 0.000523632447094 | 0.272727272727 | NEFM NEFL NEFH | intermediate filament bundle assembly |
WP:WP3680 | 0.000785986780671 | 0.272727272727 | NEFM NEFL NEFH | Association Between Physico-Chemical Features and Toxicity Associated Pathways |
WP:WP4352 | 0.000823817782697 | 0.363636363636 | NEFM XPNPEP3 NEFL VIM | Ciliary landscape |
GO:0019215 | 0.0024645761864 | 0.272727272727 | VIM SYNM NES | intermediate filament binding |
GO:0044430 | 0.0106952876619 | 0.727272727273 | DES NEFH NES NEFM SYNM VIM NEFL INA | cytoskeletal part |
WP:WP383 | 0.0220329934501 | 0.181818181818 | DES VIM | Striated Muscle Contraction Pathway |
Edges
Protein 1 | Protein 2 | Score | Precision | Evidence |
---|---|---|---|---|
DES | VIM | 0.97 | 0.881 | bioplex (VIM) bioplex_WMM boldt_WMM treiber_WMM |
DES | NEFM | 0.74 | 0.739 | bioplex (NEFM) bioplex_WMM boldt_WMM |
INA | NEFM | 0.707 | 0.729 | bioplex (NEFM) bioplex_WMM boldt_WMM |
SYNC | DES | 0.649 | 0.688 | bioplex (SYNC) bioplex_WMM |
NEFM | NEFL | 0.447 | 0.591 | bioplex (NEFL,NEFM) bioplex_WMM boldt boldt_WMM |
VIM | NEFM | 0.358 | 0.54 | bioplex (NEFM,VIM) bioplex_WMM boldt (VIM) boldt_WMM |
VIM | NES | 0.216 | 0.464 | hein_WMM bioplex (VIM) bioplex_WMM hein (NES) treiber_WMM |
NEFM | NES | 0.163 | 0.42 | bioplex (NEFM) bioplex_WMM |
VIM | INA | 0.123 | 0.394 | bioplex (VIM) bioplex_WMM boldt_WMM |
VIM | NEFL | 0.103 | 0.366 | bioplex (NEFL,VIM) bioplex_WMM boldt (VIM) boldt_WMM |
SYNC | VIM | 0.057 | 0.324 | hein_WMM bioplex (SYNC,VIM) bioplex_WMM hein (VIM) |
SYNC | NEFM | 0.045 | 0.28 | bioplex (SYNC) bioplex_WMM |
DES | SPATA22 | 0.042 | 0.27 | bioplex (SPATA22) bioplex_WMM |
NEFL | NEFH | 0.033 | 0.247 | bioplex (NEFH) bioplex_WMM |
SYNC | SYNM | 0.031 | 0.241 | bioplex (SYNC) bioplex_WMM |
XPNPEP3 | VIM | 0.028 | 0.233 | hein_WMM bioplex (VIM) bioplex_WMM boldt (VIM) hein (VIM) boldt_WMM |
SYNC | INA | 0.025 | 0.215 | bioplex (SYNC) bioplex_WMM |
INA | NEFH | 0.022 | 0.196 | bioplex (NEFH) bioplex_WMM |
INA | NEFL | 0.014 | 0.14 | bioplex_WMM youn_WMM WMM_only boldt_WMM |
NEFM | NEFH | 0.014 | 0.141 | bioplex (NEFH) bioplex_WMM |
SYNC | NEFL | 0.014 | 0.144 | bioplex (SYNC) bioplex_WMM |
DES | INA | 0.011 | 0.143 | bioplex_WMM WMM_only boldt_WMM |
DES | NES | 0.011 | 0.142 | bioplex_WMM WMM_only treiber_WMM |
DES | NEFL | 0.01 | 0.14 | bioplex_WMM WMM_only boldt_WMM |
XPNPEP3 | SYNC | 0.01 | 0.13 | hein_WMM bioplex (SYNC) bioplex_WMM |
NEFL | NES | 0.01 | 0.126 | bioplex_WMM WMM_only |
INA | NES | 0.01 | 0.099 | bioplex_WMM WMM_only |
XPNPEP3 | NEFM | 0.009 | 0.108 | bioplex (NEFM) bioplex_WMM boldt boldt_WMM |
XPNPEP3 | DES | 0.008 | 0.045 | bioplex_WMM WMM_only boldt_WMM |
NEFL | SYNM | 0.008 | 0.031 | bioplex_WMM youn_WMM WMM_only |
DES | SYNM | 0.008 | 0.026 | bioplex_WMM WMM_only treiber_WMM |
INA | SYNM | 0.008 | 0.006 | bioplex_WMM youn_WMM gupta_WMM WMM_only |
VIM | SYNM | 0.008 | 0.012 | bioplex_WMM WMM_only boldt_WMM treiber_WMM |
XPNPEP3 | NEFL | 0.007 | 0.01 | bioplex (NEFL) bioplex_WMM boldt boldt_WMM |
NEFM | SYNM | 0.007 | 0.01 | bioplex_WMM WMM_only |
NES | SYNM | 0.007 | 0.004 | bioplex_WMM WMM_only treiber_WMM |
XPNPEP3 | SYNM | 0.007 | 0.005 | bioplex_WMM WMM_only |
VIM | NEFH | 0.007 | 0.006 | bioplex (NEFH) bioplex_WMM |
XPNPEP3 | INA | 0.007 | 0.003 | bioplex_WMM WMM_only boldt_WMM |
DES | NEFH | 0.007 | 0.003 | bioplex_WMM WMM_only |
SPATA22 | VIM | 0.007 | 0.001 | bioplex (SPATA22) |
XPNPEP3 | SPATA22 | 0.007 | 0.001 | bioplex (SPATA22) |
XPNPEP3 | NES | 0.006 | 0.004 | bioplex_WMM WMM_only |
XPNPEP3 | NEFH | 0.006 | 0.001 | bioplex (NEFH) bioplex_WMM |
SPATA22 | NEFH | 0.005 | 0.012 | bioplex (SPATA22) bioplex_WMM |
SYNC | NES | 0.004 | 0.011 | bioplex (SYNC) bioplex_WMM |
Images
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Complex HuMAP2_04023 has an average edge precision of 0.203 which is ranked 6143 out of all 6965 complexes.
Related Complexes