hu.MAP 2.0: Complex View
Human Protein Complex Map
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Complex: HuMAP2_04346
Confidence: Medium
Proteins| Genename | Protein Name | Links |
|---|---|---|
| NBR1 | Next to BRCA1 gene 1 protein (Cell migration-inducing gene 19 protein) (Membrane component chromosome 17 surface marker 2) (Neighbor of BRCA1 gene 1 protein) (Protein 1A1-3B) | UniProt NCBI |
| AGGF1 | Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (hVG5Q) (G patch domain-containing protein 7) (Vasculogenesis gene on 5q protein) | UniProt NCBI |
| SCGN | Secretagogin | UniProt NCBI |
| SNAP23 | Synaptosomal-associated protein 23 (SNAP-23) (Vesicle-membrane fusion protein SNAP-23) | UniProt NCBI |
| GOLGB1 | Golgin subfamily B member 1 (372 kDa Golgi complex-associated protein) (GCP372) (Giantin) (Macrogolgin) | UniProt NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
| REAC:R-HSA-199992 | 0.0341769281663 | 0.4 | SNAP23 GOLGB1 | trans-Golgi Network Vesicle Budding |
| CORUM:730 | 0.0499494897235 | 0.2 | SNAP23 | SNARE complex (STX4, SNAP23, VAMP1) |
| CORUM:801 | 0.0499494897235 | 0.2 | SNAP23 | SNARE complex (STX2, SNAP23) |
| CORUM:805 | 0.0499494897235 | 0.2 | SNAP23 | SNARE complex (STX4, SNAP23) |
| CORUM:820 | 0.0499494897235 | 0.2 | SNAP23 | SNARE complex (STX6, SNAP23) |
| CORUM:915 | 0.0499494897235 | 0.2 | SNAP23 | SNARE complex (SNAP23, STX1A) |
Edges
| Protein 1 | Protein 2 | Score | Precision | Evidence |
|---|---|---|---|---|
| SCGN | AGGF1 | 0.494 | 0.619 | bioplex (SCGN) bioplex_WMM |
| SNAP23 | SCGN | 0.113 | 0.38 | bioplex (SCGN) bioplex_WMM |
| SCGN | NBR1 | 0.085 | 0.35 | bioplex (SCGN) bioplex_WMM |
| GOLGB1 | SCGN | 0.059 | 0.328 | bioplex (SCGN) bioplex_WMM |
| GOLGB1 | NBR1 | 0.008 | 0.013 | bioplex_WMM WMM_only |
| AGGF1 | NBR1 | 0.007 | 0.01 | bioplex_WMM youn_WMM WMM_only |
| GOLGB1 | AGGF1 | 0.007 | 0.006 | bioplex_WMM WMM_only |
| GOLGB1 | SNAP23 | 0.007 | 0.005 | bioplex_WMM gupta_WMM WMM_only |
| SNAP23 | NBR1 | 0.007 | 0.005 | bioplex_WMM youn_WMM WMM_only |
| SNAP23 | AGGF1 | 0.007 | 0.003 | bioplex_WMM WMM_only |
Images
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Complex HuMAP2_04346 has an average edge precision of 0.172 which is ranked 6507 out of all 6965 complexes.
Related Complexes
| Genename | Complexes |
|---|---|
| NBR1 | HuMAP2_04346 |
| AGGF1 | HuMAP2_02632 HuMAP2_03151 HuMAP2_04346 |
| SCGN | HuMAP2_01622 HuMAP2_04346 |
| SNAP23 | HuMAP2_00644 HuMAP2_03346 HuMAP2_04346 HuMAP2_06044 |
| GOLGB1 | HuMAP2_00162 HuMAP2_04346 |