hu.MAP 2.0: Complex View
Human Protein Complex Map
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Complex: HuMAP2_05007
Confidence: Medium
Proteins| Genename | Protein Name | Links |
|---|---|---|
| TGS1 | Trimethylguanosine synthase (EC 2.1.1.-) (CLL-associated antigen KW-2) (Cap-specific guanine-N2 methyltransferase) (Hepatocellular carcinoma-associated antigen 137) (Nuclear receptor coactivator 6-interacting protein) (PRIP-interacting protein with methyltransferase motif) (PIMT) (PIPMT) | UniProt NCBI |
| LSM1 | U6 snRNA-associated Sm-like protein LSm1 (Cancer-associated Sm-like) (Small nuclear ribonuclear CaSm) | UniProt NCBI |
| SNRPF | Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) | UniProt NCBI |
| SNRPGP15 | NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
| GO:0120114 | 0.00588722337212 | 1.0 | LSM1 TGS1 SNRPF | Sm-like protein family complex |
| REAC:R-HSA-194441 | 0.00818423736949 | 0.666666666667 | SNRPF TGS1 | Metabolism of non-coding RNA |
| REAC:R-HSA-191859 | 0.00818423736949 | 0.666666666667 | SNRPF TGS1 | snRNP Assembly |
| REAC:R-HSA-8953854 | 0.0206735000409 | 1.0 | LSM1 TGS1 SNRPF | Metabolism of RNA |
Edges
| Protein 1 | Protein 2 | Score | Precision | Evidence |
|---|---|---|---|---|
| SNRPF | SNRPGP15 | 0.959 | 0.865 | bioplex (SNRPF) bioplex_WMM |
| SNRPF | LSM1 | 0.034 | 0.263 | youn (LSM1) bioplex (SNRPF) bioplex_WMM |
| SNRPF | TGS1 | 0.028 | 0.23 | bioplex (SNRPF) bioplex_WMM |
| LSM1 | SNRPGP15 | 0.009 | 0.113 | bioplex_WMM WMM_only |
| LSM1 | TGS1 | 0.009 | 0.107 | bioplex_WMM WMM_only |
| TGS1 | SNRPGP15 | 0.009 | 0.108 | bioplex_WMM WMM_only |
Images
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Complex HuMAP2_05007 has an average edge precision of 0.281 which is ranked 4868 out of all 6965 complexes.
Related Complexes