hu.MAP 2.0: Complex View
Human Protein Complex Map
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Complex: HuMAP2_05156
Confidence: Medium High
Proteins| Genename | Protein Name | Links |
|---|---|---|
| PAXBP1 | PAX3- and PAX7-binding protein 1 (GC-rich sequence DNA-binding factor 1) | UniProt NCBI |
| SNRNP40 | U5 small nuclear ribonucleoprotein 40 kDa protein (U5 snRNP 40 kDa protein) (U5-40K) (38 kDa-splicing factor) (Prp8-binding protein) (hPRP8BP) (U5 snRNP-specific 40 kDa protein) (WD repeat-containing protein 57) | UniProt NCBI |
| TFIP11 | Tuftelin-interacting protein 11 (Septin and tuftelin-interacting protein 1) (STIP-1) | UniProt NCBI |
| GGCT | Gamma-glutamylcyclotransferase (EC 4.3.2.9) (Cytochrome c-releasing factor 21) | UniProt NCBI |
| RSRC1 | Serine/Arginine-related protein 53 (SRrp53) (Arginine/serine-rich coiled-coil protein 1) | UniProt NCBI |
| MTA2 | Metastasis-associated protein MTA2 (Metastasis-associated 1-like 1) (MTA1-L1 protein) (p53 target protein in deacetylase complex) | UniProt NCBI |
| MDC1 | Mediator of DNA damage checkpoint protein 1 (Nuclear factor with BRCT domains 1) | UniProt NCBI |
| TSSC4 | Protein TSSC4 (Tumor-suppressing STF cDNA 4 protein) (Tumor-suppressing subchromosomal transferable fragment candidate gene 4 protein) | UniProt NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
| CORUM:351 | 0.00203604146124 | 0.375 | TFIP11 SNRNP40 PAXBP1 | Spliceosome |
| CORUM:1181 | 0.034389337044 | 0.25 | TFIP11 SNRNP40 | C complex spliceosome |
| MIRNA:hsa-miR-505-3p | 0.0374941326738 | 0.375 | RSRC1 MDC1 MTA2 | hsa-miR-505-3p |
Edges
| Protein 1 | Protein 2 | Score | Precision | Evidence |
|---|---|---|---|---|
| TFIP11 | PAXBP1 | 1.0 | 0.949 | bioplex_WMM Guru youn_WMM Malo gupta_WMM fraction treiber_WMM |
| RSRC1 | PAXBP1 | 0.998 | 0.941 | bioplex (RSRC1) bioplex_WMM youn_WMM |
| RSRC1 | TFIP11 | 0.995 | 0.924 | hein_WMM bioplex (RSRC1) bioplex_WMM youn_WMM |
| SNRNP40 | PAXBP1 | 0.327 | 0.516 | bioplex (SNRNP40) bioplex_WMM youn_WMM gupta_WMM |
| SNRNP40 | TSSC4 | 0.224 | 0.466 | bioplex (SNRNP40,TSSC4) bioplex_WMM youn_WMM boldt_WMM |
| SNRNP40 | TFIP11 | 0.217 | 0.465 | bioplex (SNRNP40) bioplex_WMM youn_WMM gupta_WMM |
| SNRNP40 | RSRC1 | 0.111 | 0.379 | bioplex (RSRC1,SNRNP40) bioplex_WMM youn_WMM fraction |
| MTA2 | TFIP11 | 0.073 | 0.354 | youn_WMM gupta_WMM fraction |
| TSSC4 | RSRC1 | 0.062 | 0.345 | bioplex (TSSC4) bioplex_WMM |
| MDC1 | MTA2 | 0.048 | 0.295 | hein_WMM youn_WMM gupta_WMM fraction |
| TSSC4 | PAXBP1 | 0.046 | 0.292 | bioplex (TSSC4) bioplex_WMM youn_WMM |
| GGCT | SNRNP40 | 0.041 | 0.269 | bioplex_WMM youn_WMM fraction |
| MTA2 | SNRNP40 | 0.008 | 0.039 | bioplex_WMM youn_WMM fraction |
| MDC1 | SNRNP40 | 0.008 | 0.016 | youn_WMM gupta_WMM WMM_only |
| MDC1 | PAXBP1 | 0.007 | 0.006 | youn_WMM gupta_WMM WMM_only |
| MTA2 | RSRC1 | 0.007 | 0.01 | youn_WMM WMM_only |
| MDC1 | RSRC1 | 0.007 | 0.004 | youn_WMM WMM_only |
| MDC1 | TSSC4 | 0.007 | 0.003 | youn_WMM WMM_only |
| MDC1 | GGCT | 0.007 | 0.002 | youn_WMM WMM_only |
| GGCT | TFIP11 | 0.007 | 0.002 | youn_WMM WMM_only |
| MTA2 | GGCT | 0.007 | 0.003 | boldt youn_WMM boldt_WMM |
| MTA2 | TSSC4 | 0.007 | 0.004 | hein_WMM bioplex_WMM youn_WMM WMM_only |
| MDC1 | TFIP11 | 0.004 | 0.013 | youn_WMM gupta_WMM fraction |
| MTA2 | PAXBP1 | 0.0 | 0.009 | youn_WMM gupta_WMM fraction |
| TSSC4 | TFIP11 | 0.0 | 0.011 | bioplex (TSSC4) bioplex_WMM youn_WMM |
Images
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Complex HuMAP2_05156 has an average edge precision of 0.253 which is ranked 5341 out of all 6965 complexes.
Related Complexes