hu.MAP 2.0: Complex View

Genename	Protein Name	Links
GPR156	Probable G-protein coupled receptor 156 (G-protein coupled receptor PGR28) (GABAB-related G-protein coupled receptor)	UniProt NCBI
VANGL2	Vang-like protein 2 (Loop-tail protein 1 homolog) (Strabismus 1) (Van Gogh-like protein 2)	UniProt NCBI
VANGL1	Vang-like protein 1 (Loop-tail protein 2 homolog) (LPP2) (Strabismus 2) (Van Gogh-like protein 1)	UniProt NCBI
TIFA	TRAF-interacting protein with FHA domain-containing protein A (Putative MAPK-activating protein PM14) (Putative NF-kappa-B-activating protein 20) (TRAF2-binding protein)	UniProt NCBI
PHTF1	Putative homeodomain transcription factor 1	UniProt NCBI
PLD1	Phospholipase D1 (PLD 1) (hPLD1) (EC 3.1.4.4) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1)	UniProt NCBI
ZNF564	Zinc finger protein 564	UniProt NCBI

Term ID	Corrected Pval	Fraction Complex Coverage	Proteins	Term Name
HP:0008482	0.000346286800202	0.285714285714	VANGL2 VANGL1	Asymmetry of spinal facet joints
HP:0030870	0.000346286800202	0.285714285714	VANGL2 VANGL1	Abnormality of spinal facet joint
HP:0010305	0.0024218379091	0.285714285714	VANGL2 VANGL1	Absence of the sacrum
HP:0008517	0.00898332183607	0.285714285714	VANGL2 VANGL1	Aplasia/Hypoplasia of the sacrum
HP:0002475	0.0104781956652	0.285714285714	VANGL2 VANGL1	Myelomeningocele
HP:0012032	0.0138112142376	0.285714285714	VANGL2 VANGL1	Lipoma
CORUM:928	0.0499886427319	0.142857142857	VANGL2	SCRIB-VANGL2 complex

Protein 1	Protein 2	Score	Precision	Evidence
GPR156	VANGL2	0.107	0.372	bioplex (GPR156) bioplex_WMM
PHTF1	GPR156	0.084	0.349	bioplex (GPR156) bioplex_WMM
GPR156	TIFA	0.068	0.347	bioplex (GPR156) bioplex_WMM
VANGL1	GPR156	0.057	0.321	bioplex (GPR156) bioplex_WMM
GPR156	ZNF564	0.05	0.295	bioplex (GPR156) bioplex_WMM
PLD1	GPR156	0.035	0.263	bioplex (GPR156) bioplex_WMM
VANGL1	VANGL2	0.017	0.175	bioplex_WMM youn_WMM gupta_WMM WMM_only
TIFA	ZNF564	0.008	0.091	bioplex_WMM WMM_only
PHTF1	TIFA	0.008	0.087	bioplex_WMM WMM_only
PHTF1	ZNF564	0.008	0.067	bioplex_WMM WMM_only
PLD1	TIFA	0.008	0.033	bioplex_WMM WMM_only
VANGL2	TIFA	0.008	0.025	bioplex_WMM WMM_only
VANGL1	TIFA	0.008	0.012	bioplex_WMM WMM_only
PLD1	ZNF564	0.007	0.006	bioplex_WMM WMM_only
VANGL2	ZNF564	0.007	0.006	bioplex_WMM WMM_only
PLD1	PHTF1	0.007	0.003	bioplex_WMM WMM_only
VANGL1	ZNF564	0.007	0.014	bioplex_WMM WMM_only
PHTF1	VANGL2	0.007	0.005	bioplex_WMM WMM_only
VANGL1	PHTF1	0.007	0.011	bioplex_WMM WMM_only
VANGL1	PLD1	0.007	0.004	bioplex_WMM WMM_only
PLD1	VANGL2	0.007	0.004	bioplex_WMM WMM_only

Click to enlarge

Complex HuMAP2_06761 has an average edge precision of 0.119 which is ranked 6877 out of all 6965 complexes.